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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8797016_8817506_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8797016 - 8817506

Intron Length:

20491

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGTTTTTTAAAA

Flanking Amino Acid:

GILCFLPSYKLLDKLKDRWM

Intron Amino Acid Position:

594

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

28.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

0.9

0.7

88.2

29.1

Minor 5ss

31.6

-2.1

3.1

46.4

Minor BPS

0.66

1.3

76.89

33.6

Associated Gene:

Gene:

BRIP1

Ensembl Gene ID:

ENSAPLG00000009095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028059

8780652 - 8837327

56676

ENSAPLT00000009509

8780652 - 8838844

58193