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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8818538_8829670_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8818538 - 8829670

Intron Length:

11133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGATAT

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTTTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

CTATTATTAAAA

Flanking Amino Acid:

IPFPNVKDLQVELKRKYNDQ

Intron Amino Acid Position:

688

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

77.7

33.3

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

82.1

0.72

0.7

81.5

29.7

Minor 5ss

38.2

-1.3

3.4

55.2

Minor BPS

56.1

0.19

1.7

66.42

39.5

Associated Gene:

Gene:

BRIP1

Ensembl Gene ID:

ENSAPLG00000009095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028059

8780652 - 8837327

56676

ENSAPLT00000009509

8780652 - 8838844

58193