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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8829784_8832185_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8829784 - 8832185

Intron Length:

2402

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGATAA

5'SS Class:

strong_major

3'SS Sequence:

CGCTTGCCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TCTTTGTTTATC

Flanking Amino Acid:

AYRALNQALGRCIRHRSDWG

Intron Amino Acid Position:

725

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.8

79.1

24.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

68.5

0.42

0.9

61.9

34.9

Minor 5ss

31.8

-2.1

37.8

Minor BPS

48.4

-0.1

2.3

65.24

41.2

Associated Gene:

Gene:

BRIP1

Ensembl Gene ID:

ENSAPLG00000009095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028059

8780652 - 8837327

56676

ENSAPLT00000009509

8780652 - 8838844

58193