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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8832269_8834219_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8832269 - 8834219

Intron Length:

1951

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTGT

5'SS Class:

strong_major

3'SS Sequence:

CCTTCCCCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTCT

U12 Branch Point Sequence:

CTTTCTTTTTCT

Flanking Amino Acid:

FRNNPNKYITGLSKWIRQQV

Intron Amino Acid Position:

753

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.9

78.8

38.3

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

72.2

0.5

0.7

69.9

24.1

Minor 5ss

45.6

-0.5

2.9

46.2

Minor BPS

45.4

-0.2

3.6

79.44

Associated Gene:

Gene:

BRIP1

Ensembl Gene ID:

ENSAPLG00000009095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028059

8780652 - 8837327

56676

ENSAPLT00000009509

8780652 - 8838844

58193