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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8921148_8922692_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8921148 - 8922692

Intron Length:

1545

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

CCTCTGTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAC

U12 Branch Point Sequence:

CAGTTTGTACCC

Flanking Amino Acid:

DHRYKFCDNKWMVAGKAEPA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

73.1

31.1

Major BPS

61.6

0.29

1.4

63.4

Major PPT

81.5

0.71

0.8

75.6

32.8

Minor 5ss

29.9

-2.3

3.3

42.5

Minor BPS

42.7

-0.5

2.1

49.73

41.6

Associated Gene:

Gene:

TBX4

Ensembl Gene ID:

ENSAPLG00000008848

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009228

8901326 - 8926036

24711