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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8963391_8964269_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8963391 - 8964269

Intron Length:

879

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACTC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCTCCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

CAGCTCTCACCC

Flanking Amino Acid:

HLSQHMLASQGIPMPTFGGL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

35.3

Major BPS

72.7

0.56

30.1

Major PPT

81.4

0.71

0.7

76.7

25.3

Minor 5ss

36.5

-1.5

3.2

50.8

45.8

Minor BPS

44.4

-0.4

1.8

48.57

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017871

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045204

8962486 - 8968060

5575