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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8966750_8967867_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

8966750 - 8967867

Intron Length:

1118

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGCCG

5'SS Class:

major

3'SS Sequence:

CGTGTCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCGTCAC

U12 Branch Point Sequence:

CGTCACGCAGCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.1

58.1

46.4

Major BPS

47.8

-0.1

1.4

44.3

Major PPT

69.3

0.43

0.9

62.1

34.8

Minor 5ss

-2.3

3.4

39.4

Minor BPS

36.5

-1

2.2

46.11

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017871

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045204

8962486 - 8968060

5575