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Intron Name: Anas_platyrhynchos_platyrhynchos_20_8990031_9178424_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8990031 - 9178424

Intron Length:

188394

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAAACA

5'SS Class:

major

3'SS Sequence:

TTTCCCATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

GAAACACTAACC

Flanking Amino Acid:

GVSTVIDATSELQREGSIET

Intron Amino Acid Position:

792

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.1

67.7

37.5

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

84.7

0.78

0.7

28.2

Minor 5ss

31.7

-2.1

3.2

40.9

45.1

Minor BPS

46.8

-0.2

1.9

57.04

Associated Gene:

Gene:

BCAS3

Ensembl Gene ID:

ENSAPLG00000008363

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029188

8989112 - 9338279

349168