Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_900643_901080_F

Intron Information:

Intron Rank:

129343

Intron Class:

major

Intron Phase:

Intron Coordinates:

900643 - 901080

Intron Length:

438

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTGCTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAC

U12 Branch Point Sequence:

GCTGCACTGACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

36.6

Major BPS

61.3

0.28

52.7

34.2

Major PPT

79.4

0.66

0.9

73.5

Minor 5ss

29.1

-2.4

3.2

37.3

42.5

Minor BPS

45.6

-0.3

57.21

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026701

899000 - 902223

3224

ENSAPLT00000024836

899000 - 902223

3224

ENSAPLT00000024296

899000 - 902223

3224

ENSAPLT00000020258

899000 - 902223

3224

ENSAPLT00000040944

899000 - 902223

3224