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Intron Name: Anas_platyrhynchos_platyrhynchos_20_901123_901480_F

Intron Information:

Intron Rank:

129385

Intron Class:

major

Intron Phase:

Intron Coordinates:

901123 - 901480

Intron Length:

358

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

ACTTTTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTCAC

U12 Branch Point Sequence:

CCGGCTGTCACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

62.6

0.31

1.2

66.7

39.9

Major PPT

80.9

0.69

0.8

73.4

36.5

Minor 5ss

32.6

-2

3.1

44.2

Minor BPS

-0.6

2.4

54.01

48.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040944

899000 - 902223

3224