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Intron Name: Anas_platyrhynchos_platyrhynchos_20_9012226_9178424_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9012226 - 9178424

Intron Length:

166199

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAAACA

5'SS Class:

major

3'SS Sequence:

TTGTTTGTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGAACAT

U12 Branch Point Sequence:

CTCTCCCGAACA

Flanking Amino Acid:

GVSTVIDATSGAFDRSVTLL

Intron Amino Acid Position:

777

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.1

67.7

37.5

Major BPS

47.4

-0.1

1.2

52.7

41.6

Major PPT

73.6

0.53

1.1

75.2

38.8

Minor 5ss

31.7

-2.1

3.2

40.9

45.1

Minor BPS

56.1

0.19

1.9

68.97

43.1

Associated Gene:

Gene:

BCAS3

Ensembl Gene ID:

ENSAPLG00000008363

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041151

8989112 - 9338279

349168

ENSAPLT00000035920

8989112 - 9338279

349168

ENSAPLT00000032267

8989112 - 9338279

349168

ENSAPLT00000043518

8990007 - 9338279

348273