Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_901850_901945_F

Intron Information:

Intron Rank:

129370

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

901850 - 901945

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGCC

5'SS Class:

strong_major

3'SS Sequence:

CCCCCCAACCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGCTGAC

U12 Branch Point Sequence:

CCCCCCCCAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.3

35.8

Major BPS

49.4

-0

1.3

42.8

41.8

Major PPT

59.7

0.22

0.9

50.3

31.5

Minor 5ss

32.2

-2

3.3

41.8

45.1

Minor BPS

45.9

-0.3

1.9

52.85

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034030

900726 - 902223

1498