Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_9098681_9178424_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9098681 - 9178424

Intron Length:

79744

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAAACA

5'SS Class:

major

3'SS Sequence:

TTTGTTCCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TTAATGTTACCT

Flanking Amino Acid:

GVSTVIDATSEWPLAQTT*

Intron Amino Acid Position:

792

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.1

67.7

37.5

Major BPS

84.4

0.85

34.5

Major PPT

78.5

0.64

0.9

74.4

35.3

Minor 5ss

31.7

-2.1

3.2

40.9

45.1

Minor BPS

48.2

-0

2.3

72.89

43.9

Associated Gene:

Gene:

BCAS3

Ensembl Gene ID:

ENSAPLG00000008363

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008738

9098655 - 9338279

239625