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Intron Name: Anas_platyrhynchos_platyrhynchos_20_9201733_9215414_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9201733 - 9215414

Intron Length:

13682

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTTAAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ATTTTCATAATT

Flanking Amino Acid:

MTLGTITKRTGKTKPAPQIS

Intron Amino Acid Position:

514

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.4

39.5

Major BPS

100

1.24

0.5

100

Major PPT

85.8

0.8

0.9

91.3

Minor 5ss

31.6

-2.1

3.1

31.8

42.6

Minor BPS

70.9

0.73

1.5

87.01

Associated Gene:

Gene:

BCAS3

Ensembl Gene ID:

ENSAPLG00000008363

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032267

8989112 - 9338279

349168

ENSAPLT00000025827

9143161 - 9338279

195119