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Intron Name: Anas_platyrhynchos_platyrhynchos_20_9376821_9386288_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9376821 - 9386288

Intron Length:

9468

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGGGGG

5'SS Class:

major

3'SS Sequence:

GTCTTCCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

AAATTTTTAAAT

Flanking Amino Acid:

ENIQFDVYYKLYQQGRLCQL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.1

44.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

0.76

0.8

Minor 5ss

22.1

-3.2

3.4

28.8

43.7

Minor BPS

64.2

0.52

1.3

73.49

36.8

Associated Gene:

Gene:

APPBP2

Ensembl Gene ID:

ENSAPLG00000008094

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008465

9376680 - 9395667

18988