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Intron Name: Anas_platyrhynchos_platyrhynchos_20_9386378_9387113_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9386378 - 9387113

Intron Length:

736

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATATC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAA

U12 Branch Point Sequence:

TATAACTAAATT

Flanking Amino Acid:

FAKVLRALDKRHLLHHCFQA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.8

87.7

26.2

Major BPS

68.7

0.47

0.9

67.9

Major PPT

93.1

0.97

0.7

92.3

26.6

Minor 5ss

39.6

-1.2

2.9

43.3

Minor BPS

54.9

0.23

1.9

75.1

41.5

Associated Gene:

Gene:

APPBP2

Ensembl Gene ID:

ENSAPLG00000008094

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029442

9382518 - 9395350

12833

ENSAPLT00000008465

9376680 - 9395667

18988