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Intron Name: Anas_platyrhynchos_platyrhynchos_20_9391574_9392054_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9391574 - 9392054

Intron Length:

481

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAATTTA

5'SS Class:

strong_major

3'SS Sequence:

TCTATATGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

ATTTCTATATGT

Flanking Amino Acid:

VVDVLRQASKACVVKREFKK

Intron Amino Acid Position:

256

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

82.6

24.8

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

71.8

0.49

70.1

40.3

Minor 5ss

37.7

-1.4

47.2

Minor BPS

0.01

2.1

41.9

Associated Gene:

Gene:

APPBP2

Ensembl Gene ID:

ENSAPLG00000008094

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029442

9382518 - 9395350

12833

ENSAPLT00000008465

9376680 - 9395667

18988