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Intron Name: Anas_platyrhynchos_platyrhynchos_20_9392123_9392201_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9392123 - 9392201

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TATGTTCCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TGTAATATAAGT

Flanking Amino Acid:

QLIKHAVYLAREHFGAKHPK

Intron Amino Acid Position:

278

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

76.5

39.2

Major BPS

84.4

0.85

1.1

34.5

Major PPT

80.3

0.68

0.9

73.5

36.8

Minor 5ss

36.6

-1.5

2.7

46.7

41.7

Minor BPS

45.9

-0.2

67.56

42.7

Associated Gene:

Gene:

APPBP2

Ensembl Gene ID:

ENSAPLG00000008094

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029442

9382518 - 9395350

12833

ENSAPLT00000008465

9376680 - 9395667

18988