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Intron Name: Anas_platyrhynchos_platyrhynchos_20_9392308_9392673_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9392308 - 9392673

Intron Length:

366

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCAGC

5'SS Class:

strong_major

3'SS Sequence:

GTAACTCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAC

U12 Branch Point Sequence:

GTTCTTGTAACT

Flanking Amino Acid:

NICQSVAIYQTALDIRQSVF

Intron Amino Acid Position:

314

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

68.8

42.3

Major BPS

78.7

0.71

0.9

69.3

37.7

Major PPT

74.3

0.55

Minor 5ss

45.8

-0.4

2.6

60.7

Minor BPS

55.7

0.26

77.46

39.1

Associated Gene:

Gene:

APPBP2

Ensembl Gene ID:

ENSAPLG00000008094

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029442

9382518 - 9395350

12833

ENSAPLT00000008465

9376680 - 9395667

18988