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Intron Name: Anas_platyrhynchos_platyrhynchos_20_9393708_9394124_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9393708 - 9394124

Intron Length:

417

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATTA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTCCTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATGAA

U12 Branch Point Sequence:

CCTATATGAATT

Flanking Amino Acid:

RLYQSMRKFKEAEEMHIKAI

Intron Amino Acid Position:

448

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.3

1.02

0.7

86.9

22.8

Major BPS

66.7

0.41

57.8

Major PPT

81.9

0.72

0.8

76.6

32.1

Minor 5ss

41.5

-0.9

3.1

48.2

Minor BPS

47.1

-0.1

1.7

62.04

42.2

Associated Gene:

Gene:

APPBP2

Ensembl Gene ID:

ENSAPLG00000008094

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029442

9382518 - 9395350

12833

ENSAPLT00000008465

9376680 - 9395667

18988