Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_9409587_9410501_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9409587 - 9410501

Intron Length:

915

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATC|GTGAGATAC

5'SS Class:

major

3'SS Sequence:

GCTTCCCTTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTCCAA

U12 Branch Point Sequence:

CTTCCCTTACAG

Flanking Amino Acid:

DGLDRDTFKICKEFLRPFKK

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.7

0.3

1.3

60.9

34.4

Major BPS

59.3

0.23

1.2

70.5

35.7

Major PPT

79.9

0.67

0.8

72.5

32.3

Minor 5ss

34.3

-1.8

3.1

42.2

39.2

Minor BPS

54.4

1.9

62.06

45.4

Associated Gene:

Gene:

C17orf64

Ensembl Gene ID:

ENSAPLG00000026871

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041602

9404854 - 9411541

6688