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Intron Name: Anas_platyrhynchos_platyrhynchos_20_9452396_9457960_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9452396 - 9457960

Intron Length:

5565

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATCTAT

5'SS Class:

strong_major

3'SS Sequence:

TTTATTCTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTTTGGTTTACT

Flanking Amino Acid:

GDGVPPKVAEVIYCSFGGMS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

76.8

34.6

Major BPS

0.92

0.9

86.2

29.1

Major PPT

82.2

0.72

0.7

81.6

30.3

Minor 5ss

45.6

-0.5

2.9

64.6

46.7

Minor BPS

0.08

2.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007802

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032455

9417702 - 9504005

86304

ENSAPLT00000031665

9452268 - 9512524

60257

ENSAPLT00000008113

9427518 - 9504005

76488