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Intron Name: Anas_platyrhynchos_platyrhynchos_20_947509_951370_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

947509 - 951370

Intron Length:

3862

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTACCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTACCA

Flanking Amino Acid:

VTNAQFPDEIRNLEPVTQLY

Intron Amino Acid Position:

299

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

79.6

32.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

68.8

0.42

1.1

68.5

41.3

Minor 5ss

31.9

-2.1

3.6

47.6

Minor BPS

63.6

0.42

1.9

80.01

35.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015683

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016351

947344 - 1028965

81622

ENSAPLT00000012307

912046 - 998764

86719