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Intron Name: Anas_platyrhynchos_platyrhynchos_20_9476891_9479503_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9476891 - 9479503

Intron Length:

2613

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

CATCTCTTAATA

Flanking Amino Acid:

ANEFLNLLFQVCHIVLGLRP

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

84.3

29.6

Major BPS

0.92

0.9

86.2

29.1

Major PPT

94.6

0.6

88.2

29.1

Minor 5ss

42.7

-0.8

58.2

46.4

Minor BPS

67.9

0.56

1.2

69.46

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007802

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032455

9417702 - 9504005

86304

ENSAPLT00000031665

9452268 - 9512524

60257

ENSAPLT00000008113

9427518 - 9504005

76488