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Intron Name: Anas_platyrhynchos_platyrhynchos_20_9479790_9481721_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9479790 - 9481721

Intron Length:

1932

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

CTACCAATTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

TTATAAATAACT

Flanking Amino Acid:

WHQWKEYVKYDANPVVIEPS

Intron Amino Acid Position:

398

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

82.7

29.2

Major BPS

78.6

0.71

78.6

Major PPT

65.4

0.35

0.9

55.8

38.8

Minor 5ss

38.4

-1.3

2.7

48.5

40.3

Minor BPS

54.2

0.21

2.1

80.86

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007802

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032455

9417702 - 9504005

86304

ENSAPLT00000031665

9452268 - 9512524

60257

ENSAPLT00000008113

9427518 - 9504005

76488