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Intron Name: Anas_platyrhynchos_platyrhynchos_20_9494982_9495711_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9494982 - 9495711

Intron Length:

730

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAAGA

5'SS Class:

strong_major

3'SS Sequence:

GTTTGCAATGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTGCAA

U12 Branch Point Sequence:

ATCTGACTAACT

Flanking Amino Acid:

LAEVHSSNIKNFPQDNQKVR

Intron Amino Acid Position:

960

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

74.1

36.4

Major BPS

65.8

0.39

1.4

77.7

37.1

Major PPT

0.2

1.2

58.3

41.4

Minor 5ss

32.2

-2

40.7

45.1

Minor BPS

47.5

-0.1

2.3

72.35

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007802

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032455

9417702 - 9504005

86304

ENSAPLT00000031665

9452268 - 9512524

60257

ENSAPLT00000008113

9427518 - 9504005

76488