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Intron Name: Anas_platyrhynchos_platyrhynchos_20_9495824_9496372_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9495824 - 9496372

Intron Length:

549

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

TTTCTGTCTACA

Flanking Amino Acid:

PTSASSPVQTDTSTGSSTNG

Intron Amino Acid Position:

997

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

73.7

30.1

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

85.9

0.81

0.8

80.2

Minor 5ss

29.1

-2.4

3.4

37.8

Minor BPS

44.1

-0.4

2.4

64.71

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007802

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032455

9417702 - 9504005

86304

ENSAPLT00000031665

9452268 - 9512524

60257

ENSAPLT00000008113

9427518 - 9504005

76488