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Intron Name: Anas_platyrhynchos_platyrhynchos_20_9503294_9503831_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9503294 - 9503831

Intron Length:

538

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATCAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAG

U12 Branch Point Sequence:

TTTTCTTTTTTT

Flanking Amino Acid:

WYCYNDSSCKELHPDEIDTD

Intron Amino Acid Position:

1537

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

80.3

34.3

Major BPS

67.2

0.43

1.5

77.4

37.3

Major PPT

96.3

1.04

0.5

95.7

14.9

Minor 5ss

35.2

-1.7

3.1

49.5

46.7

Minor BPS

46.2

-0.2

3.6

83.31

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007802

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032455

9417702 - 9504005

86304

ENSAPLT00000031665

9452268 - 9512524

60257

ENSAPLT00000008113

9427518 - 9504005

76488