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Intron Name: Anas_platyrhynchos_platyrhynchos_20_9527760_9529113_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9527760 - 9529113

Intron Length:

1354

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TCAATGTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATTTATTT

Flanking Amino Acid:

EKPIELSISQVSQFARVHFD

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.6

1.05

0.7

81.4

32.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

72.5

0.51

65.6

40.7

Minor 5ss

34.5

-1.8

2.9

43.8

43.9

Minor BPS

64.4

0.53

1.7

84.57

36.4

Associated Gene:

Gene:

CA4

Ensembl Gene ID:

ENSAPLG00000007520

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021494

9527571 - 9544495

16925

ENSAPLT00000007809

9527571 - 9536450

8880