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Intron Name: Anas_platyrhynchos_platyrhynchos_20_9529840_9530090_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9529840 - 9530090

Intron Length:

251

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

ATATTTCTATTT

Flanking Amino Acid:

GIAVLGFFIKVDEENKNYAT

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

77.2

32.8

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

0.79

0.8

82.4

33.2

Minor 5ss

32.6

-2

3.4

44.1

43.8

Minor BPS

47.7

-0

1.8

67.16

38.1

Associated Gene:

Gene:

CA4

Ensembl Gene ID:

ENSAPLG00000007520

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021494

9527571 - 9544495

16925

ENSAPLT00000007809

9527571 - 9536450

8880