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Intron Name: Anas_platyrhynchos_platyrhynchos_20_9530184_9530690_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9530184 - 9530690

Intron Length:

507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TATTTTGTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTAAT

U12 Branch Point Sequence:

TTGCCCTCAACT

Flanking Amino Acid:

SIDGEKQAMELHIVHIREDA

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

73.2

37.5

Major BPS

73.1

0.57

71.9

31.3

Major PPT

85.6

0.8

0.9

80.1

37.1

Minor 5ss

31.6

-2.1

3.4

43.4

44.3

Minor BPS

72.2

0.77

1.5

86.19

39.5

Associated Gene:

Gene:

CA4

Ensembl Gene ID:

ENSAPLG00000007520

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021494

9527571 - 9544495

16925

ENSAPLT00000007809

9527571 - 9536450

8880