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Intron Name: Anas_platyrhynchos_platyrhynchos_20_9530846_9532564_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9530846 - 9532564

Intron Length:

1719

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTCTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATTTTTTAAACT

Flanking Amino Acid:

KWNIENNGHTVKITLSTSPK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.6

1.17

0.7

12.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

88.2

0.86

0.8

81.3

36.4

Minor 5ss

-2.5

3.7

43.2

43.8

Minor BPS

69.1

0.68

1.6

85.39

35.1

Associated Gene:

Gene:

CA4

Ensembl Gene ID:

ENSAPLG00000007520

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021494

9527571 - 9544495

16925

ENSAPLT00000007809

9527571 - 9536450

8880