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Intron Name: Anas_platyrhynchos_platyrhynchos_20_9533421_9536443_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9533421 - 9536443

Intron Length:

3023

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTCAGTATA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TAATTCTGAATG

Flanking Amino Acid:

MQLGYHWCYQSQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.3

80.1

34.8

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

100

1.12

0.4

100

Minor 5ss

37.2

-1.5

2.8

47.9

40.8

Minor BPS

60.6

0.19

1.5

62.19

39.6

Associated Gene:

Gene:

CA4

Ensembl Gene ID:

ENSAPLG00000007520

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007809

9527571 - 9536450

8880