About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_9558576_9558919_R

Intron Information:

Intron Rank:
22
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
9558576 - 9558919
Intron Length:
344

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AGA|GTAAGTACG
5'SS Class:
major
3'SS Sequence:
GTCTCTTAATCAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
CTCTTAA
U12 Branch Point Sequence:
TGTCTCTTAATC
Flanking Amino Acid:
VIKHCWRKWRAEMAALAAAE
Intron Amino Acid Position:
823

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
75.8
0.61
1.1
69.1
41.8
Major BPS
69.9
0.49
1
61.3
37
Major PPT
70.9
0.47
1
70.6
39
Minor 5ss
37.3
-1.4
2.6
40.5
39
Minor BPS
73.6
0.72
1.2
76.33
33.4

Associated Gene:

Gene:
MYO19
Ensembl Gene ID:
ENSAPLG00000007223
Chromosome:
20

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000007517
9557211 - 9574320
17110