Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_20_9568008_9568400_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9568008 - 9568400

Intron Length:

393

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGGTAC

5'SS Class:

major

3'SS Sequence:

GATTATATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTATAT

U12 Branch Point Sequence:

TTTTAGAAAACT

Flanking Amino Acid:

DRSTQNNIFKVLSGLLHLGN

Intron Amino Acid Position:

301

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.3

37.3

Major BPS

70.4

0.51

67.1

39.4

Major PPT

74.4

0.55

66.9

43.2

Minor 5ss

32.4

-2

3.2

41.1

45.5

Minor BPS

45.4

-0.2

2.6

77.86

44.1

Associated Gene:

Gene:

MYO19

Ensembl Gene ID:

ENSAPLG00000007223

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007517

9557211 - 9574320

17110