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Intron Name: Anas_platyrhynchos_platyrhynchos_20_9569077_9569280_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
9569077 - 9569280

Intron Length:
204

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGTGTTCA

5'SS Class:
strong_major

3'SS Sequence:
TTTCTGTCTTCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TCATTAC

U12 Branch Point Sequence:
CAGTCATTACCT

Flanking Amino Acid:
NERNFHIFYQITKGATAEER

Intron Amino Acid Position:
243

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.9
0.8
0.9
75.5
29.5

Major BPS
62.3
0.31
1.2
54
41.2

Major PPT
87
0.83
0.7
84.9
29.9

Minor 5ss
41.1
-1
2.6
50.2
46.2

Minor BPS
53.1
0.18
2
70.14
46.3

Associated Gene:

Gene:
MYO19

Ensembl Gene ID:

Chromosome:
20

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9557211 - 9574320
17110