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Intron Name: Anas_platyrhynchos_platyrhynchos_20_9569384_9569748_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
9569384 - 9569748

Intron Length:
365

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAATAATT

5'SS Class:
strong_major

3'SS Sequence:
TCTTTGCCTCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTAAAAT

U12 Branch Point Sequence:
TCTTTTTTTCCC

Flanking Amino Acid:
FGKYIQLQLDRFHHLSSASI

Intron Amino Acid Position:
208

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84.7
0.82
0.9
86.5
28.6

Major BPS
70.6
0.51
1.1
75.9
34.4

Major PPT
78.2
0.63
0.8
70.2
36.5

Minor 5ss
39.5
-1.2
3.1
58.2
46

Minor BPS
41.8
-0.6
3.5
65.14
41.2

Associated Gene:

Gene:
MYO19

Ensembl Gene ID:

Chromosome:
20

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9557211 - 9574320
17110