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Intron Name: Anas_platyrhynchos_platyrhynchos_20_9587690_9590597_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9587690 - 9590597

Intron Length:

2908

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TACTATGTGACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

ATTTCTTTTACT

Flanking Amino Acid:

SLDTHKPKPLGEGSSSTLST

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.9

84.1

30.2

Major BPS

73.1

0.58

79.6

29.1

Major PPT

65.6

0.35

1.1

60.6

44.3

Minor 5ss

43.3

-0.7

2.8

49.9

46.4

Minor BPS

75.8

0.89

1.5

90.35

33.1

Associated Gene:

Gene:

GGNBP2

Ensembl Gene ID:

ENSAPLG00000006578

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040775

9580416 - 9598103

17688