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Intron Name: Anas_platyrhynchos_platyrhynchos_20_9621052_9621538_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
9621052 - 9621538

Intron Length:
487

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACGCGAG

5'SS Class:
major

3'SS Sequence:
GCTCTCTCCTCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTCAG

U12 Branch Point Sequence:
TGGTTCTCAGCA

Flanking Amino Acid:
IDDGHIININSMNGHSVVPQ

Intron Amino Acid Position:
263

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.3
0.67
1.1
63.4
43.1

Major BPS
71
0.52
1.5
79.6
35.6

Major PPT
75.9
0.58
0.8
73
31.9

Minor 5ss
34.6
-1.8
3.5
46
49.3

Minor BPS
51.5
0.04
1.8
64.12
42.2

Associated Gene:

Gene:
DHRS11

Ensembl Gene ID:

Chromosome:
20

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9614209 - 9625203
10995