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Intron Name: Anas_platyrhynchos_platyrhynchos_20_9897492_9910856_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9897492 - 9910856

Intron Length:

13365

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

TCTTGCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAGAAT

U12 Branch Point Sequence:

ATCTGTGGAAAA

Flanking Amino Acid:

GQEFDNAVESCCKAVEALLR

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

84.2

33.6

Major BPS

48.5

-0

1.4

56.1

37.3

Major PPT

83.1

0.74

0.8

77.1

31.6

Minor 5ss

44.6

-0.6

2.9

70.4

39.5

Minor BPS

39.2

-0.8

2.3

51.25

40.6

Associated Gene:

Gene:

AATF

Ensembl Gene ID:

ENSAPLG00000006346

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006586

9893639 - 9941869

48231