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Intron Name: Anas_platyrhynchos_platyrhynchos_20_9923308_9925202_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9923308 - 9925202

Intron Length:

1895

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTGCATCCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

AATGCTGTAACT

Flanking Amino Acid:

LDPNDQVAMGRQWLAIQKLR

Intron Amino Acid Position:

489

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.96

0.8

77.5

32.9

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

73.1

0.52

0.9

70.1

36.2

Minor 5ss

26.6

-2.7

30.5

43.3

Minor BPS

54.7

0.23

2.1

75.1

41.9

Associated Gene:

Gene:

AATF

Ensembl Gene ID:

ENSAPLG00000006346

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006586

9893639 - 9941869

48231