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Intron Name: Anas_platyrhynchos_platyrhynchos_20_9960912_9961425_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9960912 - 9961425

Intron Length:

514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGACG

5'SS Class:

major

3'SS Sequence:

CGTCGCTGACCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACCTGAA

U12 Branch Point Sequence:

CGTCGCTGACCA

Flanking Amino Acid:

HMEMYADRESRGGILEPEGT

Intron Amino Acid Position:

2055

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

44.2

Major BPS

60.8

0.27

51.3

35.5

Major PPT

58.9

0.2

1.1

50.7

42.7

Minor 5ss

31.2

-2.2

3.3

39.9

45.9

Minor BPS

43.6

-0.4

2.1

54.35

43.9

Associated Gene:

Gene:

ACACA

Ensembl Gene ID:

ENSAPLG00000006678

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033706

9948784 - 10062330

113547

ENSAPLT00000039117

9947556 - 10064568

117013

ENSAPLT00000019744

9947556 - 10049194

101639

ENSAPLT00000039017

9947556 - 10062330

114775

ENSAPLT00000007210

9949008 - 10051639

102632

ENSAPLT00000038991

9948784 - 10062330

113547

ENSAPLT00000036264

9947556 - 10062330

114775