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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10000464_10001039_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10000464 - 10001039

Intron Length:

576

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGGCA

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTCTCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAA

U12 Branch Point Sequence:

CTGGCCTCAAAA

Flanking Amino Acid:

GTFTFYPCVYSFLCRGIAVD

Intron Amino Acid Position:

633

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.73

68.4

36.4

Major BPS

70.6

0.51

1.1

71.6

36.4

Major PPT

78.2

0.64

0.9

69.5

41.7

Minor 5ss

35.6

-1.6

3.5

47.4

48.2

Minor BPS

50.2

1.8

60.62

45.2

Associated Gene:

Gene:

LAMA5

Ensembl Gene ID:

ENSAPLG00000010163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021580

9985841 - 10022668

36828

ENSAPLT00000010775

9985841 - 10022760

36920

ENSAPLT00000021929

9985841 - 10022668

36828