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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10001149_10001664_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10001149 - 10001664

Intron Length:

516

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGCTA

5'SS Class:

strong_major

3'SS Sequence:

TCATGCCCTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TGTTGTGTAACC

Flanking Amino Acid:

FIADLADFFLHKVYLVPAAQ

Intron Amino Acid Position:

670

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

71.4

40.1

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

73.4

0.53

0.9

65.6

Minor 5ss

34.5

-1.8

3.4

44.3

44.6

Minor BPS

-0

2.4

70.5

41.3

Associated Gene:

Gene:

LAMA5

Ensembl Gene ID:

ENSAPLG00000010163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021580

9985841 - 10022668

36828

ENSAPLT00000010775

9985841 - 10022760

36920

ENSAPLT00000021929

9985841 - 10022668

36828