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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10003351_10003569_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10003351 - 10003569

Intron Length:

219

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

GTCCTTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAC

U12 Branch Point Sequence:

TCAGTCTCACCC

Flanking Amino Acid:

RVPEGKQLWLDYILVVPEDS

Intron Amino Acid Position:

859

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

36.6

Major BPS

67.3

0.43

1.2

71.3

36.7

Major PPT

75.1

0.56

0.9

68.8

37.1

Minor 5ss

33.5

-1.9

41.5

39.2

Minor BPS

45.9

-0.3

1.9

54.44

43.8

Associated Gene:

Gene:

LAMA5

Ensembl Gene ID:

ENSAPLG00000010163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021929

9985841 - 10022668

36828

ENSAPLT00000021580

9985841 - 10022668

36828

ENSAPLT00000010775

9985841 - 10022760

36920