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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10004470_10004695_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10004470 - 10004695

Intron Length:

226

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGAG

5'SS Class:

strong_major

3'SS Sequence:

GTGTCCTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

AGGTTTCTAACG

Flanking Amino Acid:

PGCDVDSGQCRCKPNVIGRQ

Intron Amino Acid Position:

1036

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.1

37.5

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

71.4

0.48

65.5

Minor 5ss

23.1

-3.1

3.2

27.7

44.2

Minor BPS

49.7

-0.1

1.7

54.6

40.7

Associated Gene:

Gene:

LAMA5

Ensembl Gene ID:

ENSAPLG00000010163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021580

9985841 - 10022668

36828

ENSAPLT00000010775

9985841 - 10022760

36920

ENSAPLT00000021929

9985841 - 10022668

36828