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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10004841_10005144_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10004841 - 10005144

Intron Length:

304

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

GCTTGTCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CACTGTTGAGCT

Flanking Amino Acid:

DPVTGQCHCKENVEGPRCDQ

Intron Amino Acid Position:

1085

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

1.3

75.3

40.8

Major BPS

66.3

0.4

1.1

41.8

Major PPT

78.9

0.65

0.9

69.2

41.8

Minor 5ss

32.3

-2

2.8

43.1

43.7

Minor BPS

43.5

-0.4

57.35

45.5

Associated Gene:

Gene:

LAMA5

Ensembl Gene ID:

ENSAPLG00000010163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021929

9985841 - 10022668

36828

ENSAPLT00000021580

9985841 - 10022668

36828

ENSAPLT00000010775

9985841 - 10022760

36920