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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10005286_10005660_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10005286 - 10005660

Intron Length:

375

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGAG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCCCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAACAC

U12 Branch Point Sequence:

CTCTCTGGAAAA

Flanking Amino Acid:

CRSAEKYRAEFIDMNRWLLL

Intron Amino Acid Position:

1132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

38.2

Major BPS

47.8

-0.1

53.1

30.9

Major PPT

86.8

0.83

0.7

81.5

23.5

Minor 5ss

28.6

-2.5

3.5

36.8

47.7

Minor BPS

44.7

-0.4

2.1

56.75

42.8

Associated Gene:

Gene:

LAMA5

Ensembl Gene ID:

ENSAPLG00000010163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021929

9985841 - 10022668

36828

ENSAPLT00000021580

9985841 - 10022668

36828

ENSAPLT00000010775

9985841 - 10022760

36920