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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10005823_10006001_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10005823 - 10006001

Intron Length:

179

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGAACA

5'SS Class:

strong_major

3'SS Sequence:

GTCTCTCCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

TGTATGTGATCC

Flanking Amino Acid:

VAPSSYLGDRVSSYGGHLRY

Intron Amino Acid Position:

1186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

74.4

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

76.1

0.59

0.8

73.4

31.6

Minor 5ss

33.3

-1.9

2.8

33.8

41.1

Minor BPS

42.2

-0.6

2.3

56.39

41.8

Associated Gene:

Gene:

LAMA5

Ensembl Gene ID:

ENSAPLG00000010163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021929

9985841 - 10022668

36828

ENSAPLT00000021580

9985841 - 10022668

36828

ENSAPLT00000010775

9985841 - 10022760

36920