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Intron Name: Anas_platyrhynchos_platyrhynchos_21_10006271_10006542_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10006271 - 10006542

Intron Length:

272

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCCCACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTAAT

U12 Branch Point Sequence:

TCTTCTCCCACT

Flanking Amino Acid:

VHEGQLQLVEGNFRHTETHN

Intron Amino Acid Position:

1248

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.7

83.9

30.3

Major BPS

64.3

0.36

1.2

65.3

38.6

Major PPT

70.2

0.46

0.8

63.8

32.7

Minor 5ss

38.4

-1.3

2.9

48.7

47.5

Minor BPS

-0.1

2.2

72.5

44.6

Associated Gene:

Gene:

LAMA5

Ensembl Gene ID:

ENSAPLG00000010163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021929

9985841 - 10022668

36828

ENSAPLT00000021580

9985841 - 10022668

36828

ENSAPLT00000010775

9985841 - 10022760

36920